CDS

Accession Number TCMCG006C41591
gbkey CDS
Protein Id XP_013742666.1
Location join(8393599..8394192,8394290..8396077)
Gene LOC106445623
GeneID 106445623
Organism Brassica napus

Protein

Length 793aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013887212.2
Definition pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Pentatricopeptide repeat-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000373        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0019684        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045292        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048564        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAGCTAATAGAGCTTGCGACTTCTCTCCCCCGCTCTCCACCGCCTCTCCTTCCGGAGCCTTCGCCACCGTCACCGTCACCATCCCGAACTTCTACTTCTTCTCTCCCTCCCTAAACCCCAACATCATCCCCCATCTCCCAATCATCCGCCACCGCAGCAGCTCCTCGCGTCGCTTACTCCGCCGTCTCTCCTTCAGTCGAAACGAAACTCAGTCCTTTCCACAGCCATTCACTGCTAATTCCGCTTCTCACCGTACCAGAACTTTCGTCGAACACGTTGCAGGCACTAAAGAATCACCAAACCAAACCATCGAAGTCTACGATTTCGGAGATTTAGAGTCTGCTAGGAACGATTTGAGGAACGTTGCGACTCGTAGAGTCGAGACTGATGTGGAAGTGAGAGAGATAGAAGACTTGCCGGAAGAGTGGCGCCGCTCCAAGCTAGCCTGGCTGTGTAAAGAAGTTCCGTCGCATAAAGCCGTGACGCTTGTGAGGCTCTTGAATGCTCAGAAGAAATGGGTTCGTCAAGAAGACGCTACTTACATCTGTGTCCATTGCACACGGATTCGCGAGAACGAAACAGGATTCAGAGTGTATAGATGGATGACGCAGCAGAATTGGTACCGGTTTGATTTCGGTTTAGCCACAAAGCTAGCTGATTTCTTAGGGAAAGAGAGGAAGTTCACGAAATGTCGAGAGGTGTTCGATGATATTATGAATCAAGGACGTGTTCCAAGCGAATCCACGTTTCACATTCTTGTAGTTGCTTATCTAAGTAGCTCAGAGGAAGGTTGTTTCCAAGAAGCGTGTAGTGTTTACAATAGAATGATTCAACTTGGAGGTTACAGACCGCGTCTTAGTCTGCATAACTCTTTGTTTAGAGCTTTGGTTAGCAAACAGGGAGGGCCTTCGAGTGATGACGTTAGGCAAGCTGAGTTTATCTTCCATAACGTTGTGACGACCGGGCTTGAGGTGCAGAAAGATATCTATAGCGGGCTAATCTGGCTGCATAGTTGTCAAGACGAAGTTGACATAGAGAGGATAAACTATCTAAGAGAAGAGATGAGGAAGGCCGGTTTTGAGGAGAGTAACGAAGTTGTGGTTTCGTTACTCAGAGCGTATGCTAAGGAAGGAGAAGTGGAAGAAGTTGAGAGGACATGGCTTGAATTGCTTGGTTTGGATTGCGGTATACCTTCTCAAGCGTTTGTGTACAAAATGGAAGCTTACGCAAAAGTAGGCGATTTCGCGAGAGCTTTGAAGATATTTAGGGAAATGGATAAGCATTTAGGTGGTGCAACAGTTTCTGGATACCACAAGATCATTGAAGTCGTATGTAAAATAAATCAAGTGGAACTTGCGGAATCTCTCTTGGAAGAGTTTTTAGAAACCGGGAAGAAGCAGCTTCTACCTTCATATATAGAGATAGTCGAAATGTACTTTGATTTGGGTTTACATGAGAAACTGGAGAAGGCTTTTGTTGACTGCTTGGAGAAATGTCAACCTAACCAGACTATATATAACATATACTTGGAGTCATTGGTTAATATAGGCAACCTTGAGAAAGCAGGGGACGTTTTCGATGAAATGAAGAACAACGGGACAATCAATGTGAATGCTAGTTCCTGCAACACCGTTTTGAAAGGATACTTGGATTCTGGAAATCATGCGAAGGCAAAGAAGATATATGAGCTGATGAGTTTGAAGAAGTACGAAGTCGAGTCACCGCTTATGGAAAAGCTTGATTACATCCTTAGCTTGGTGAGAAAAGAAGTGAAGAAACCGTTGAGCATGAAGCTAAGTAAAGAACAGCGAGAGGTATTGTTGGGTTTGCTGTTAGGTGGTTTGCGAGTGGAATCAGACAAAGAGAGGAAGAGTCACAAGATCATGTTTGAATTCAGAGGGAAGTCTCAAGCTCATCTGATACTGAGACAACACATACATGATCAGTTCCGTGAGTGGTTGCCTCATTCCGAAGACGAGGATATACCATTAGAATTCTCCTCCATTTCTCATTCATGCTTTGGGTTTTACGCTGATAACTTCTGGCCAAATGGTCGACCTGAGATTCCCAAACTGATTCACCGGTGGCTCTCGCCTCAGTCACTGGCTTATTGGTATATGTACAGTGGATATAGAACAGCCTCGGGAGATGTTATCTTGAGGTTGAAGGGAAGTGTAGAAGGTATCGAGAAGGTTGTGAAGGCTCTGAGAGCTAAATCTATGGAATGTAGGGTTAAGAAGAAAGGAAACGTTTTCTGGATTGGACTTCAGGGAACAAACTCGGGTTTGTTCTGGAAGCTAATAGAGCCTCACGTCTTAGAGGACATGAAAGATCATCTAAGACCCGCTTATGAAGCAGTGGACCATGATAGGGACTAA
Protein:  
MIANRACDFSPPLSTASPSGAFATVTVTIPNFYFFSPSLNPNIIPHLPIIRHRSSSSRRLLRRLSFSRNETQSFPQPFTANSASHRTRTFVEHVAGTKESPNQTIEVYDFGDLESARNDLRNVATRRVETDVEVREIEDLPEEWRRSKLAWLCKEVPSHKAVTLVRLLNAQKKWVRQEDATYICVHCTRIRENETGFRVYRWMTQQNWYRFDFGLATKLADFLGKERKFTKCREVFDDIMNQGRVPSESTFHILVVAYLSSSEEGCFQEACSVYNRMIQLGGYRPRLSLHNSLFRALVSKQGGPSSDDVRQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIERINYLREEMRKAGFEESNEVVVSLLRAYAKEGEVEEVERTWLELLGLDCGIPSQAFVYKMEAYAKVGDFARALKIFREMDKHLGGATVSGYHKIIEVVCKINQVELAESLLEEFLETGKKQLLPSYIEIVEMYFDLGLHEKLEKAFVDCLEKCQPNQTIYNIYLESLVNIGNLEKAGDVFDEMKNNGTINVNASSCNTVLKGYLDSGNHAKAKKIYELMSLKKYEVESPLMEKLDYILSLVRKEVKKPLSMKLSKEQREVLLGLLLGGLRVESDKERKSHKIMFEFRGKSQAHLILRQHIHDQFREWLPHSEDEDIPLEFSSISHSCFGFYADNFWPNGRPEIPKLIHRWLSPQSLAYWYMYSGYRTASGDVILRLKGSVEGIEKVVKALRAKSMECRVKKKGNVFWIGLQGTNSGLFWKLIEPHVLEDMKDHLRPAYEAVDHDRD